Rhizaria

Supergroup unites mainly amoeboid heterotrophic (in some cases – Chlorarachnion – having autotrophic eukaryotic symbiont) organisms capable of forming the rhizopodia – long, narrow and often branched pseudopodia. Amoeboid cells can fuse to form plasmodia. All rhizarians are aerobes with mitochondria having tubular cristae. In some groups, at certain stages of the life cycle, the flagellated cells with two unequal smooth anterior flagella may form. The cytostome is absent. The cell can form lorica or skeletal structures penetrating the cytoplasm. In parasitic forms, the cytoskeleton undergoes reduction, and the plasmodia of such forms resemble the vegetative body of some fungi. The sexual process is expressed in many groups. Rhizaria include many soil amoebae as well as radiolarians and foraminifera living in the Ocean. All these are zoological objects. Of the mycological objects related to rhizaria the group of plasmodiophores can be mentioned.

References

Adl S.M., Simpson A.G., Lane C.E. et al. The revised classification of eukaryotes. J. Eukaryot. Microbiol. 2012. V. 59. P. 429–493.

Caullery M. Appendice aux sporozoaires. Classe des haplosporidies (Haplosporidia Caullery et Mesnil, 1899), In: Traité de zoologie. Ed. By P.P. Grassé. Masson, Paris 1 (2), 1953, pp. 922–934.

Cavalier-Smith T. Kingdom Protozoa and its 18 phyla. Microbiol. Rev. 1993. V. 57. P. 953–994.

Cavalier-Smith T. A revised six-kingdom system of life. Biological Reviews. 1998. V. 73 (3). P. 203–266. Https://doi.org/10.1111/j.1469-185X.1998.tb00030.x

Cavalier-Smith T. The phagotrophic origin of eukaryotes and phylogenetic classification of Protozoa. Int. J. Syst. Evol. Microbiol. 2002. V. 52. P. 297–354.

Cavalier-Smith T., Chao E.E. Phylogeny and classification of phylum Cercozoa (Protozoa). Protist. 2003. V. 154. P. 341–358. Https://doi.org/10.1078/143446103322454112

Cavalier-Smith T., Chao E., Lewis R. Multigene phylogeny and cell evolution of chromist infrakingdom Rhizaria: contrasting cell organisation of sister phyla Cercozoa and Retaria. Protoplasma. 2018. V. 255. P. 1517–1574 https://doi.org/10.1007/s00709-018-1241-1

Cook W.R.I. The methods of nuclear division in the Plasmodiophorales. Ann. Bot. 1928. V. 62. P. 347–377.

Copeland H.F. The classification of lower organisms. Paolo Alto, 1956.

Engler A., Prantl K. Die Natürlichen Pflanzenfamilien nebst ihren Gattungen und wichtigeren Arten, insbesondere den Nutzpflanzen, unter Mitwirkung zahlreicher hervorragender Fachgelehrten. V. 4. W. Engelmann, Leipzig, 1897, pp. 274–354.

Ehrenberg C.G. Die Infustionsthierhcen. Leipzig, 1838.

Fol H. Sur le Sticholonche Zanclea et un nouvel ordre de Rhizopodes. Geneve, 1883.

Haeckel E. Monographie der Medusen. Zweiter Theil. Erste Hälfte: Die Tiefsee-Medusen der Challenger-Reise. Zweite Hälfte: Der Organismus. 1881.

Hartikainen H., Ashford O.S., Berney C. Et al. Lineage-specific molecular probing reveals novel diversity and ecological portioning of haplosporidians. ISME J. 2013. 1751–7362.

Hess S., Melkonian M. The mystery of clade X: Orciraptor gen. Nov. And Viridiraptor gen. Nov. Are highly specialised, algivorous amoeboflagellates (Glissomonadida, Cercozoa). Protist. 2013. V. 164. P. 706–747. Https://doi.org/10.1016/j.protis.2013.07.003

Hibberd D.J., Norris R.E. Cytology and ultrastructure of Chlorarachnion reptans (Chlorarachniophyta divisio nova, Chlorarachniophyceae classis nova). J. Phycol. 1984. V. 20 (2). P. 310–330.

Howe A.T., Bass D., Vickerman K. Et al. Phylogeny, taxonomy, and astounding genetic diversity of glissomonadida ord. Nov., the dominant gliding zooflagellates in soil (Protozoa: Cercozoa). Protist. 2009. V. 160 (2). P. 159–189. Https://doi.org/10.1016/j.protis.2008.11.007

Howe A.T., Bass D., Scoble J.M. et al. Novel cultured protists idntify deep-branching environmental DNA clades of Cercozoa: new genera Tremula, Micrometopion, Minimassisteria, Nudifila, Peregrinia. Protist. 2011. V. 162. P. 332–372. Https://doi.org/10.1016/j.protis.2010.10.002

Lemmermann E. Silicoflagellatae. Ber. Dtsch. Bot. Ges. 1901. V. 19. P. 247–271.

Mikrjukov K.A. Taxonomy and phylogeny of heliozoa. II. The order Dimorphida Siemensma, 1991 (Cercomonadea classis n.): Diversity and relatedness with cercomonads. Acta Protozoologica. 2000. V. 39 (2). P. 99–116.

Müller J., Über die Thalassicollen, Polycystinen und Acanthometren des Mittelmeeres. Abh. Königl. Preuß. Akad. Wiss. Berlin. 1858. P. 1–62.
d’Orbigny A. Tableau methodique de la classe des Cephalopodes. Ann. Sci. Nat. Paris. 1826. V. 7. P. 245–314.

Patterson D.J., Zölffel M. Heterotrophic flagellates of uncertain taxonomic position. In: The Biology of Free-Living Heterotrophic Flagellates In: Patterson D.J. and Larson J. Eds. Clarendon Press, Oxford, 1991, pp. 427–476.

Reuss, A.E. Entwurf einer systematischen Zusammenstellung der Foraminiferen. Sitzungsberichte Der Kaiserlichen Akademie Der Wissenschaften. Mathematisch-Naturwissenschaftliche Classe. Abt. 1, Mineralogie, Botanik, Zoologie, Anatomie, Geologie Und Paläontologie., 1862. V. 44 (1) . P. 355–396.

Schiller J. Dinoflagellatae (Peridinineae) in monographischer Behandlung, Teil 2 (1–4). In: Rabenhorst, L. (Ed.). Kryptogamen-Flora von Deutschland, Österreichs und der Schweiz. Akad. Verlag., Leipzig, 1935–1937.

Vickerman K., Appleton P.L., Clarke K.J. Aurigamonas solis n. gen., n. sp., a soil-dwelling predator with unusual helioflagellate organisation and belonging to a novel clade within the Cercozoa.
Protist. 2005. V. 156 (3). P. 335–354. Https://doi.org/10.1016/j.protis.2005.07.00
• DIAPHORETICKES [Adl et al., 2012]
Unranked clade SAR [Stramenopila-Alveolata-Rhizaria + Telonemia]
•• Rhizaria [Cavalier-Smith, 2002]
•••Gymnosphaerida [Mikrjukov, 2000]
••• Cercozoa [Cavalier-Smith, 1998]
•••• Cercomonadida [Cavalier-Smith et al., 2018]
•••• Paracercomonadida [Cavalier-Smith et al., 2018]
•••• Glissomonadida [Howe et al., 2009]
•••• Viridiraptoridae [Hess, Melkonian, 2013]
•••• Pansomonadidae [Vickerman et al., 2005]
•••• Helkesida [Cavalier-Smith, 2018]
••••Thecofilosea [Cavalier-Smith, Chao, 2003]
•••• Cryomonadida [Cavalier-Smith, 1993]
•••• Ventricleftida [Howe et al., 2011]
•••• Tectofilosida [Cavalier-Smith, Chao, 2003]
•••• Ebriacea [Lemmermann, 1901]
•••• Thaumatomastigidae [Patterson, Zölfell, 1991]
•••• Euglyphida [Copeland, 1956]
••• Metromonadea [Howe et al., 2011]
••• Granofilosea [Howe et al., 2009]
••• Chlorarachnea [Hibberd, Norris, 1984]
••• Endomyxa [Adl et al., 2018]
•••• Vampyrellida [Hess et al., 2012]
•••• Phytomyxea [Engler, Prantl, 1897]
•••••Plasmodiophorida [Cook, 1928]
•••••Phagomyxida [Cavalier-Smith, 1993]
•••• Filoreta [Howe et al., 2009]
•••• Gromiida [Reuss, 1862]
••• Ascetosporea [Howe et al., 2009]
•••• Haplosporida [Caullery, 1953]
•••• Microcytida [Hartikainen et al., 2013]
•••• Paradiniidae [Schiller, 1935]
••• Retaria [Cavalier-Smith, 2002]
•••• Foraminifera [d’Orbigny, 1826]
•••• Acantharea [Haeckel, 1881]
•••• Taxopodida [Fol, 1883]
•••• Polycystinea [Ehrenberg, 1838]
••• Aquavolonida [Bass, Berney 2018]
••• Tremulida [Howe et al., 2011]

Rank correlation:
• ~Subdomain
•• ~ Kingdom
••• ~ Phylum
••••~ Class